STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BICC1BicC family RNA binding protein 1. (872 aa)    
Predicted Functional Partners:
SLC35F1
Solute carrier family 35 member F1.
      
 0.707
SDK2
Sidekick cell adhesion molecule 2.
      
 0.589
MYRIP
Myosin VIIA and Rab interacting protein.
      
 0.577
SSX2IP
SSX family member 2 interacting protein.
   
  
 0.567
TENT2
Terminal nucleotidyltransferase 2.
   
 
 0.544
APOLD1
Apolipoprotein L domain containing 1.
      
 0.525
PUF60
Poly(U) binding splicing factor 60.
      
 0.522
UGDH
UDP-glucose 6-dehydrogenase; Involved in the biosynthesis of glycosaminoglycans; hyaluronan, chondroitin sulfate, and heparan sulfate. Belongs to the UDP-glucose/GDP-mannose dehydrogenase family.
      
 0.515
CNOT3
CCR4-NOT transcription complex subunit 3.
    
 
 0.481
ITGB8
Integrin beta; Belongs to the integrin beta chain family.
      
 0.453
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.