STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
BICC1BicC family RNA binding protein 1. (872 aa)    
Predicted Functional Partners:
PDGFRA
Platelet-derived growth factor receptor alpha; Tyrosine-protein kinase that acts as a cell-surface receptor for PDGFA, PDGFB and PDGFC and plays an essential role in the regulation of embryonic development, cell proliferation, survival and chemotaxis. Depending on the context, promotes or inhibits cell proliferation and cell migration. Plays an important role in the differentiation of bone marrow-derived mesenchymal stem cells. Required for normal skeleton development.
   
  
 0.993
SLC35F1
Solute carrier family 35 member F1.
      
 0.808
MYRIP
Myosin VIIA and Rab interacting protein.
      
 0.737
PIM3
Protein kinase domain-containing protein.
      
 0.737
SDK2
Sidekick cell adhesion molecule 2.
      
 0.737
TRIM71
Tripartite motif containing 71.
      
 0.737
APOLD1
Apolipoprotein L domain containing 1.
      
 0.688
CPEB1
Uncharacterized protein.
   
 
 0.666
CENPJ
Centromere protein J.
      
 0.636
PSIP1
PC4 and SFRS1 interacting protein 1.
   
  
 0.607
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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