STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMARCA5SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5. (1052 aa)    
Predicted Functional Partners:
BAZ1A
Bromodomain adjacent to zinc finger domain 1A.
    
 0.953
CECR2
CECR2 histone acetyl-lysine reader.
   
 0.903
RSF1
Remodeling and spacing factor 1.
   
 0.896
POLE3
DNA polymerase epsilon 3, accessory subunit.
    
 0.886
BPTF
Bromodomain PHD finger transcription factor.
   
 0.886
RBBP4
RB binding protein 4, chromatin remodeling factor.
   
 0.849
RBBP7
RB binding protein 7, chromatin remodeling factor.
   
 0.849
CHRAC1
Chromatin accessibility complex subunit 1.
    
 
 0.793
BAZ2A
Bromodomain adjacent to zinc finger domain 2A.
    
 0.780
MYBBP1A
MYB binding protein 1a.
   
 0.775
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.