Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SMARCA5SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5. (1052 aa)    
Predicted Functional Partners:
RSF1
Remodeling and spacing factor 1.
   
 0.969
BAZ1A
Bromodomain adjacent to zinc finger domain 1A.
   
 0.922
G3TEP4_LOXAF
Uncharacterized protein.
   
 0.919
BAZ1B
Bromo domain-containing protein.
   
 0.919
BAZ2A
Bromodomain adjacent to zinc finger domain 2A.
   
 0.903
POLE3
DNA polymerase epsilon 3, accessory subunit.
    
 0.903
MYBBP1A
MYB binding protein 1a.
   
 0.885
BPTF
Bromodomain PHD finger transcription factor.
   
 0.885
CECR2
CECR2 histone acetyl-lysine reader.
   
 0.885
SF3B1
Splicing factor 3b subunit 1.
   
  0.880
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
Server load: low (10%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.