STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
MAATS1CFAP91 domain-containing protein. (305 aa)    
Predicted Functional Partners:
TTC29
Tetratricopeptide repeat domain 29.
   
 0.880
WDR66
WD_REPEATS_REGION domain-containing protein.
   
 
 0.877
CFAP44
Uncharacterized protein.
   
 0.806
CFAP43
Uncharacterized protein.
   
 
 0.803
G3TZZ3_LOXAF
Uncharacterized protein.
   
 
 0.803
DNALI1
Dynein axonemal light intermediate chain 1.
   
 
 0.798
DNAH1
Dynein axonemal heavy chain 1.
   
 0.781
RSPH3
Radial spoke head 3.
   
 
 0.775
ARMC4
Armadillo repeat containing 4.
  
   0.763
ZMYND12
Zinc finger MYND-type containing 12.
   
   0.763
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.