STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LHX2LIM homeobox 2. (384 aa)    
Predicted Functional Partners:
LDB1
LIM domain binding 1.
    
 0.811
LDB2
LIM domain binding 2.
    
 0.691
NFATC1
Nuclear factor of activated T cells 1.
      
 0.642
MFNG
MFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase.
    
 
 0.625
LFNG
LFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase.
    
 
 0.625
DLX3
Distal-less homeobox 3.
     
 0.625
GATA5
GATA binding protein 5.
    
 0.623
LMO3
LIM domain only 3.
   
 
 0.598
LMO1
LIM domain only 1.
   
 
 0.598
HOXC13
Homeobox C13.
    
 
 0.597
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.