STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LHX2LIM homeobox 2. (384 aa)    
Predicted Functional Partners:
LDB1
LIM domain binding 1.
    
 0.872
LDB2
LIM domain binding 2.
    
 0.656
TBR1
T-box brain transcription factor 1.
    
 0.536
DLX3
Distal-less homeobox 3.
      
 0.514
VSX2
Visual system homeobox 2.
   
  
0.473
EBF4
EBF family member 4.
   
 
 0.450
EBF3
EBF transcription factor 3.
   
 
 0.450
EBF1
EBF transcription factor 1.
   
 
 0.450
EBF2
EBF transcription factor 2.
   
 
 0.450
MSX2
Msh homeobox 2.
    
 
 0.447
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.