STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
NFKBIL1NFKB inhibitor like 1. (382 aa)    
Predicted Functional Partners:
ZRANB2
Zinc finger RANBP2-type containing 2.
    
   0.797
EAF1
ELL associated factor 1.
    
   0.712
VARS2
Valyl-tRNA synthetase 2, mitochondrial; Belongs to the class-I aminoacyl-tRNA synthetase family.
      
 0.709
FMC1-LUC7L2
FMC1-LUC7L2 readthrough.
    
   0.665
LUC7L
LUC7 like.
    
   0.665
MAPK8IP3
Mitogen-activated protein kinase 8 interacting protein 3.
      
 0.653
ATP6V1G2
V-type proton ATPase subunit G; Catalytic subunit of the peripheral V1 complex of vacuolar ATPase (V-ATPase). V-ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells.
      
 0.648
VARS1
Valyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family.
      
 0.559
LTA
Tumor necrosis factor ligand 1E; Belongs to the tumor necrosis factor family.
 
    
 0.558
RNH1
Ribonuclease/angiogenin inhibitor 1.
      
 0.557
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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