STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SYNGAP1Synaptic Ras GTPase activating protein 1. (1067 aa)    
Predicted Functional Partners:
DLG4
Discs large MAGUK scaffold protein 4; Belongs to the MAGUK family.
   
 
 0.787
GRIN2B
Glutamate ionotropic receptor NMDA type subunit 2B.
   
 
 0.752
ARHGAP5
Rho GTPase activating protein 5.
    
 0.678
DLG3
Discs large MAGUK scaffold protein 3; Belongs to the MAGUK family.
    
 
 0.669
CUTA
CutA divalent cation tolerance homolog.
      
 0.605
SHANK3
ANK_REP_REGION domain-containing protein.
   
 0.593
KCNH1
Uncharacterized protein.
      
 0.580
DLGAP2
DLG associated protein 2.
   
 
 0.574
ARHGAP35
Rho GTPase activating protein 35.
    
 0.551
G3TU53_LOXAF
Uncharacterized protein.
   
 0.541
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.