STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LTFLactotransferrin; Belongs to the transferrin family. (708 aa)    
Predicted Functional Partners:
TFRC
Transferrin receptor.
  
 0.954
TFR2
Transferrin receptor 2.
  
 0.729
MIS12
MIS12 kinetochore complex component.
    
   0.672
SAMSN1
SAM domain, SH3 domain and nuclear localization signals 1.
      
 0.625
SPG21
SPG21 abhydrolase domain containing, maspardin.
      
 0.621
EPO
Erythropoietin.
  
 0.619
PIGR
Polymeric immunoglobulin receptor.
   
 
 0.593
PSMA4
Proteasome subunit alpha type.
   
  
 0.583
CLU
Clusterin; Belongs to the clusterin family.
   
 0.580
CD84
CD84 molecule.
   
  
 0.570
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.