STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMYD1SET and MYND domain containing 1. (445 aa)    
Predicted Functional Partners:
ASH2L
ASH2 like, histone lysine methyltransferase complex subunit.
    
 0.616
RBBP5
RB binding protein 5, histone lysine methyltransferase complex subunit.
    
 0.592
EED
Embryonic ectoderm development.
   
 0.566
SETD3
Protein-histidine N-methyltransferase.
   
 
 0.552
MYLPF
Myosin light chain, phosphorylatable, fast skeletal muscle.
   
 
 0.535
SUZ12
SUZ12 polycomb repressive complex 2 subunit.
    
 0.533
ZNF367
Zinc finger protein 367.
   
 0.525
TNNI1
Troponin I1, slow skeletal type.
   
  
 0.522
MYL4
Myosin light chain 4.
   
 
 0.517
ZNF366
Zinc finger protein 366.
   
 0.517
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.