STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SMYD1SET and MYND domain containing 1. (445 aa)    
Predicted Functional Partners:
MYOM2
Myomesin 2.
   
 0.910
MYOM1
Myomesin 1.
   
 0.900
MYOZ2
Myozenin 2.
   
 
 0.896
CAMKMT
Calmodulin-lysine N-methyltransferase.
     
 0.886
PLOD2
Procollagen-lysine,2-oxoglutarate 5-dioxygenase 2.
   
 0.878
PLOD3
Procollagen-lysine,2-oxoglutarate 5-dioxygenase 3.
   
 0.878
PLOD1
Procollagen-lysine,2-oxoglutarate 5-dioxygenase 1.
   
 0.878
KMT2E
Lysine methyltransferase 2E.
    
 0.872
SRL
Sarcalumenin; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family.
   
 
 0.870
SETD2
SET domain containing 2, histone lysine methyltransferase.
     
 0.869
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.