STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
MPPE1Metallophosphoesterase 1. (398 aa)    
Predicted Functional Partners:
PGAP3
Post-GPI attachment to proteins factor 3; Involved in the lipid remodeling steps of GPI-anchor maturation; Belongs to the PGAP3 family.
    
 0.967
PGAP1
GPI inositol-deacylase; Involved in inositol deacylation of GPI-anchored proteins. GPI inositol deacylation may important for efficient transport of GPI- anchored proteins from the endoplasmic reticulum to the Golgi.
    
 0.941
PGAP2
Post-GPI attachment to proteins 2.
    
 0.860
YARS1
Tyrosine--tRNA ligase.
   
   0.775
GNPDA2
Glucosamine-6-phosphate deaminase 2.
 
      0.753
GNPDA1
Glucosamine-6-phosphate isomerase.
 
      0.745
MED27
Mediator complex subunit 27.
      
 0.737
PSMB5
Proteasome subunit beta.
 
      0.632
G3TZA6_LOXAF
Uncharacterized protein.
 
      0.604
PIGG
Phosphatidylinositol glycan anchor biosynthesis class G.
    
 
 0.568
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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