STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
G3T0U2_LOXAFUncharacterized protein. (355 aa)    
Predicted Functional Partners:
TRIM28
Tripartite motif containing 28.
   
 0.801
NGFR
Nerve growth factor receptor.
    
 0.797
TRAF6
TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.
    
  0.794
G3T3H6_LOXAF
SCAN box domain-containing protein.
  
  
0.717
PGBD1
PiggyBac transposable element derived 1.
    
 
 0.706
ZNF213
Uncharacterized protein.
    
   0.666
MZF1
Myeloid zinc finger 1.
    
   0.656
TRIM33
Tripartite motif containing 33.
   
 0.561
NOC2L
Uncharacterized protein.
    
 
 0.511
TRIM24
Tripartite motif containing 24.
   
 0.490
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.