STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
YJU2YJU2 splicing factor homolog. (319 aa)    
Predicted Functional Partners:
DHX38
DEAH-box helicase 38.
   
 0.996
CDC40
Cell division cycle 40.
    
 0.995
CWC25
CWC25 spliceosome associated protein homolog.
   
 0.994
SNRNP200
Small nuclear ribonucleoprotein U5 subunit 200.
    
 0.992
CWC22
CWC22 spliceosome associated protein homolog.
    
 0.992
CDC5L
Cell division cycle 5 like.
    
 
 0.991
PLRG1
Pleiotropic regulator 1.
    
 
 0.991
XAB2
XPA binding protein 2.
    
 
 0.991
PRPF19
Pre-mRNA processing factor 19.
    
 
 0.978
CRNKL1
Crooked neck pre-mRNA splicing factor 1.
    
 
 0.975
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.