STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
G3T0V1_LOXAFUncharacterized protein. (274 aa)    
Predicted Functional Partners:
RIMS2
Regulating synaptic membrane exocytosis 2.
   
 0.947
G3UF18_LOXAF
C2 domain-containing protein.
   
 0.947
UNC13C
Uncharacterized protein.
 
      0.900
G3T030_LOXAF
Uncharacterized protein.
   
 0.759
RIMS2-2
Uncharacterized protein.
   
 0.759
RIMS3
Regulating synaptic membrane exocytosis 3.
   
 0.706
SNAP25
Synaptosomal-associated protein; Belongs to the SNAP-25 family.
   
 0.672
STXBP1
Syntaxin binding protein 1; Belongs to the STXBP/unc-18/SEC1 family.
   
 0.634
VAMP1
Vesicle associated membrane protein 1.
   
 0.626
STXBP2
Syntaxin binding protein 2; Belongs to the STXBP/unc-18/SEC1 family.
   
 0.616
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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