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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CLBA1Clathrin binding box of aftiphilin containing 1. (327 aa)    
Predicted Functional Partners:
VWA5B2
Von Willebrand factor A domain containing 5B2.
      
 0.587
LRWD1
Leucine rich repeats and WD repeat domain containing 1.
      
 0.575
TICRR
TOPBP1 interacting checkpoint and replication regulator.
      
 0.546
TTC6
Tetratricopeptide repeat domain 6.
   
    0.542
SLC44A4
Solute carrier family 44 member 4; Belongs to the CTL (choline transporter-like) family.
   
    0.542
CTXN1
Cortexin 1.
   
    0.542
SLC4A8
Anion exchange protein.
   
    0.542
KIF9
Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
      
 0.529
LRATD2
LRAT domain containing 2.
      
 0.524
RELT
RELT TNF receptor.
      
 0.523
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.