Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
MRPS36Mitochondrial ribosomal protein S36. (102 aa)    
Predicted Functional Partners:
DLD
Dihydrolipoyl dehydrogenase.
   
 0.973
MRPS23
Mitochondrial ribosomal protein S23.
   
 
 0.957
MRPS25
Mitochondrial ribosomal protein S25.
   
 
 0.940
MRPS21
Mitochondrial ribosomal protein S21.
   
 0.937
MRPS15
Mitochondrial ribosomal protein S15; Belongs to the universal ribosomal protein uS15 family.
   
 0.926
MRPS22
Mitochondrial ribosomal protein S22.
   
 
 0.923
MRPS33
Mitochondrial ribosomal protein S33.
   
 0.922
MRPS31
Mitochondrial ribosomal protein S31.
   
 0.922
DLST
Dihydrolipoamide S-succinyltransferase.
   
 0.918
MRPS30
Mitochondrial ribosomal protein S30.
    
 0.916
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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