STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GATA6Uncharacterized protein. (244 aa)    
Predicted Functional Partners:
SOX17
SRY-box transcription factor 17.
   
 0.791
NKX2-5
NK2 homeobox 5.
   
 0.772
ZFPM2
Zinc finger protein, FOG family member 2.
    
 0.764
LMCD1
LIM and cysteine rich domains 1.
    
 0.749
FOXA1
Forkhead box A1.
   
 0.690
SOX7
Uncharacterized protein.
   
 0.642
LMO2
LIM domain only 2.
    
 0.634
FOXA2
Forkhead box A2.
   
 0.632
ZFPM1
Zinc finger protein, FOG family member 1.
   
 0.631
FOXA3
Forkhead box A3.
   
 0.604
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.