STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SMAP1Small ArfGAP 1. (441 aa)    
Predicted Functional Partners:
SMAP2
Small ArfGAP2.
    
   0.788
ARFGAP1
ADP ribosylation factor GTPase activating protein 1.
    
 0.759
SDHA
Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial; Flavoprotein (FP) subunit of succinate dehydrogenase (SDH) that is involved in complex II of the mitochondrial electron transport chain and is responsible for transferring electrons from succinate to ubiquinone (coenzyme Q).
     
  0.720
SH3YL1
SH3 and SYLF domain containing 1.
    
 
 0.554
TBCD
Tubulin folding cofactor D.
      
 0.554
ASAP3
ArfGAP with SH3 domain, ankyrin repeat and PH domain 3.
    
 0.547
DENND5B
DENN domain containing 5B.
      
 0.535
ARFGAP2
ADP ribosylation factor GTPase activating protein 2.
    
 0.512
ARFGAP3
ADP ribosylation factor GTPase activating protein 3.
    
 0.512
CLSTN1
Calsyntenin 1.
      
 0.502
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.