STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
DDX21DExD-box helicase 21. (787 aa)    
Predicted Functional Partners:
MYBBP1A
MYB binding protein 1a.
   
 0.977
EBNA1BP2
EBNA1 binding protein 2.
   
 0.977
PES1
Pescadillo ribosomal biogenesis factor 1.
   
 0.973
DHX9
DExH-box helicase 9.
   
 0.959
DDX50
DExD-box helicase 50.
   
   0.954
SF3B1
Splicing factor 3b subunit 1.
   
 0.942
GNL3
G protein nucleolar 3.
   
 0.938
MYO1C
Myosin IC; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.
    
  0.926
DEK
DEK proto-oncogene.
   
 0.916
RSL1D1
Ribosomal L1 domain containing 1.
   
 
 0.893
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.