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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KANK4KN motif and ankyrin repeat domains 4. (1013 aa)    
Predicted Functional Partners:
REL
REL proto-oncogene, NF-kB subunit.
   
 0.771
CFDP1
Craniofacial development protein 1; May play a role during embryogenesis.
    
 
 0.699
TRIM28
Tripartite motif containing 28.
    
 0.682
PATJ
PATJ crumbs cell polarity complex component.
    
 0.631
AGBL1
Uncharacterized protein.
    
 
 0.580
LOXHD1
Lipoxygenase homology domains 1.
    
 0.490
TRAPPC1
Trafficking protein particle complex subunit; Belongs to the TRAPP small subunits family.
    
  0.473
G3TWA1_LOXAF
Uncharacterized protein.
    
 0.460
MPDZ
Multiple PDZ domain crumbs cell polarity complex component.
    
 0.454
RELB
RELB proto-oncogene, NF-kB subunit.
   
 0.442
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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