STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
KANK4KN motif and ankyrin repeat domains 4. (1013 aa)    
Predicted Functional Partners:
REL
REL proto-oncogene, NF-kB subunit.
   
 0.812
TRAPPC1
Trafficking protein particle complex subunit; Belongs to the TRAPP small subunits family.
    
  0.808
TRAPPC5
Trafficking protein particle complex subunit 5; May play a role in vesicular transport from endoplasmic reticulum to Golgi.
    
   0.805
MAP11
Microtubule associated protein 11.
    
   0.792
TRAPPC4
Trafficking protein particle complex subunit; Belongs to the TRAPP small subunits family.
    
   0.769
PATJ
PATJ crumbs cell polarity complex component.
    
 0.756
CFDP1
Craniofacial development protein 1; May play a role during embryogenesis.
      
 0.748
AGBL1
Uncharacterized protein.
    
 
 0.736
TRAPPC10
Uncharacterized protein.
    
   0.702
TRAPPC9
Trafficking protein particle complex 9.
    
   0.692
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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