STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LY6HLymphocyte antigen 6 family member H. (126 aa)    
Predicted Functional Partners:
LYNX1
Ly6/neurotoxin 1.
      
 0.829
LYPD2
LY6/PLAUR domain containing 2.
   
  
 0.740
ZNRD1
DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family.
      
 0.705
LYPD6
LY6/PLAUR domain containing 6.
   
  
 0.692
RNF39
Ring finger protein 39.
      
 0.692
SSUH2
Ssu-2 homolog.
      
 0.628
CPQ
Carboxypeptidase Q.
      
 0.590
G3UCL2_LOXAF
UPAR/Ly6 domain-containing protein.
   
  
 0.583
ZNF622
Zinc finger protein 622.
      
 0.567
ARMH4
Armadillo like helical domain containing 4.
      
 0.545
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.