STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MRPL53Mitochondrial ribosomal protein L53. (99 aa)    
Predicted Functional Partners:
MRPL50
Mitochondrial ribosomal protein L50.
   
 
 0.934
MRPL47
Mitochondrial ribosomal protein L47.
    
 
 0.898
MRPL51
Mitochondrial ribosomal protein L51.
    
 
 0.892
MRPS33
Mitochondrial ribosomal protein S33.
   
 
 0.890
MRPL40
Mitochondrial ribosomal protein L40.
   
 
 0.867
MRPL4
Mitochondrial ribosomal protein L4.
   
 
 0.862
MRPL10
Mitochondrial ribosomal protein L10.
   
 
 0.860
MRPS31
Mitochondrial ribosomal protein S31.
   
 
 0.855
MRPL46
Mitochondrial ribosomal protein L46.
   
 
 0.848
GADD45GIP1
GADD45G interacting protein 1.
    
 
 0.843
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.