Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
MRPL53Mitochondrial ribosomal protein L53. (99 aa)    
Predicted Functional Partners:
MRPL50
Mitochondrial ribosomal protein L50.
   
 0.892
MRPL12
Mitochondrial ribosomal protein L12.
   
 0.856
G3TR24_LOXAF
Uncharacterized protein.
   
 0.843
MRPS30
Mitochondrial ribosomal protein S30.
    
 
 0.829
MRPL32
Mitochondrial ribosomal protein L32.
   
  0.819
MRPL47
Mitochondrial ribosomal protein L47.
   
 0.811
MRPL11
Mitochondrial ribosomal protein L11; Belongs to the universal ribosomal protein uL11 family.
   
 
 0.810
MRPL42
Mitochondrial ribosomal protein L42.
   
 0.810
MRPL10
Mitochondrial ribosomal protein L10.
   
 0.806
MRPL17
Mitochondrial ribosomal protein L17; Belongs to the bacterial ribosomal protein bL17 family.
   
  0.792
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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