STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
VWA8Von Willebrand factor A domain containing 8. (1907 aa)    
Predicted Functional Partners:
C19orf47
Chromosome 19 open reading frame 47.
   
    0.993
NUDT12
Nudix hydrolase 12.
   
 0.734
STKLD1
Serine/threonine kinase like domain containing 1.
   
 0.699
MFSD6
Major facilitator superfamily domain containing 6.
      
 0.680
TRMT61B
tRNA methyltransferase 61B.
   
  
 0.679
FAAP24
FA core complex associated protein 24.
    
 0.645
C1orf194
Chromosome 1 open reading frame 194.
    
 
 0.617
WBP4
WW domain binding protein 4.
      
 0.572
APLP2
Amyloid beta precursor like protein 2.
     
 0.548
FOXA1
Forkhead box A1.
    
   0.540
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.