STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VWA8Von Willebrand factor A domain containing 8. (1907 aa)    
Predicted Functional Partners:
WBP4
WW domain binding protein 4.
      
 0.659
MRPS31
Mitochondrial ribosomal protein S31.
      
 0.569
FANCM
FA complementation group M.
   
 0.540
POLD2
DNA polymerase delta 2, accessory subunit.
    
 0.531
NDUFB7
NADH:ubiquinone oxidoreductase subunit B7.
   
 
 0.524
RTN4IP1
Reticulon 4 interacting protein 1.
    
 
 0.523
G3SSC9_LOXAF
Tudor domain-containing protein.
    
 0.515
CBR4
Carbonyl reductase 4.
   
 
 0.514
POLD1
DNA polymerase.
   
 0.514
NUP98
Nucleoporin 98.
    
 0.511
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.