STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
DPY19L1Dpy-19 like C-mannosyltransferase 1. (744 aa)    
Predicted Functional Partners:
TSR3
Probable ribosome biogenesis protein C16orf42 homolog; Probable pre-rRNA processing protein involved in ribosome biogenesis.
      
 0.732
CCDC62
Uncharacterized protein.
      
 0.682
HIPK4
Homeodomain interacting protein kinase 4.
      
 0.675
TSR2
TSR2 ribosome maturation factor.
      
 0.625
ZPBP
Zona pellucida binding protein.
   
  
 0.621
CCDC152
Coiled-coil domain containing 152.
      
 0.618
GGN
Gametogenetin.
      
 0.602
P4HTM
Prolyl 4-hydroxylase, transmembrane.
      
 0.594
OSBPL8
Oxysterol-binding protein; Belongs to the OSBP family.
   
  
 0.592
SPACA1
Sperm acrosome associated 1.
   
  
 0.590
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.