STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DPY19L1Dpy-19 like C-mannosyltransferase 1. (744 aa)    
Predicted Functional Partners:
CCDC62
Uncharacterized protein.
      
 0.600
HIPK4
Homeodomain interacting protein kinase 4.
      
 0.584
TSR3
Probable ribosome biogenesis protein C16orf42 homolog; Probable pre-rRNA processing protein involved in ribosome biogenesis.
      
 0.577
SPACA1
Sperm acrosome associated 1.
      
 0.576
SPATA16
Spermatogenesis associated 16.
      
 0.574
CASC1
Cancer susceptibility 1.
   
    0.542
ZPBP
Zona pellucida binding protein.
   
  
 0.533
PICK1
Protein interacting with PRKCA 1.
      
 0.528
GOPC
PDZ domain-containing protein.
   
  
 0.493
SPATA46
Spermatogenesis associated 46.
      
 0.459
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.