STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCNT2Cyclin T2; Belongs to the cyclin family. (730 aa)    
Predicted Functional Partners:
CDK9
Cyclin dependent kinase 9; Belongs to the protein kinase superfamily.
   
 0.997
CCNT1
Cyclin T1; Belongs to the cyclin family.
    
0.957
AFF4
AF4/FMR2 family member 4.
   
 0.938
CDK13
Cyclin dependent kinase 13.
   
 0.893
CDK12
Cyclin dependent kinase 12.
   
 0.888
SUPT5H
Transcription elongation factor SPT5.
   
 0.830
ELL3
Elongation factor for RNA polymerase II 3.
    
 0.819
CCNH
Cyclin H; Belongs to the cyclin family.
     
 0.808
NELFE
Negative elongation factor complex member E.
    
 0.792
ELL
Elongation factor for RNA polymerase II.
    
 0.791
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.