STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CCNT2Cyclin T2; Belongs to the cyclin family. (730 aa)    
Predicted Functional Partners:
CDK9
Cyclin dependent kinase 9; Belongs to the protein kinase superfamily.
   
 0.998
AFF4
AF4/FMR2 family member 4.
   
 0.997
CCNT1
Cyclin T1; Belongs to the cyclin family.
    
0.986
LARP7
La ribonucleoprotein domain family member 7.
   
 0.938
CDK12
Cyclin dependent kinase 12.
   
 0.931
ELL3
Elongation factor for RNA polymerase II 3.
   
 0.907
CDK13
Cyclin dependent kinase 13.
   
 0.892
G3UG48_LOXAF
Uncharacterized protein.
   
 
 0.892
SUPT5H
Transcription elongation factor SPT5.
   
 0.849
CDK7
Cyclin dependent kinase 7; Belongs to the protein kinase superfamily.
     
 0.817
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.