STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
TTC7ATetratricopeptide repeat domain 7A. (798 aa)    
Predicted Functional Partners:
FAM126A
Family with sequence similarity 126 member A.
    
 
 0.883
TTC7B
Uncharacterized protein.
    
   0.768
G3UAD4_LOXAF
Uncharacterized protein.
    
   0.768
EFR3B
EFR3 homolog B.
   
 
 0.757
PI4KA
Phosphatidylinositol 4-kinase alpha; Belongs to the PI3/PI4-kinase family.
   
 
 0.722
EFR3A
EFR3 homolog A.
   
 
 0.674
FAM126B
Family with sequence similarity 126 member B.
    
 
 0.624
ZNF513
Zinc finger protein 513.
      
 0.588
BRAT1
BRCA1 associated ATM activator 1.
      
 0.586
GUCY2C
Guanylate cyclase.
      
 0.578
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.