STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TTC7ATetratricopeptide repeat domain 7A. (798 aa)    
Predicted Functional Partners:
PI4KA
Phosphatidylinositol 4-kinase alpha; Belongs to the PI3/PI4-kinase family.
    
 
 0.790
FAM126A
Family with sequence similarity 126 member A.
    
 
 0.727
EFR3B
EFR3 homolog B.
   
 
 0.725
EFR3A
EFR3 homolog A.
   
 
 0.690
FAM126B
Family with sequence similarity 126 member B.
    
 
 0.657
TMEM150A
Transmembrane protein 150A.
      
 0.572
TTC4
Tetratricopeptide repeat domain 4.
      
 0.521
ZNF513
Zinc finger protein 513.
    
 
 0.514
TTC37
Tetratricopeptide repeat domain 37.
      
 0.441
LYPD6
LY6/PLAUR domain containing 6.
      
 0.438
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.