STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
RSBN1Round spermatid basic protein 1. (802 aa)    
Predicted Functional Partners:
G3UKN3_LOXAF
Uncharacterized protein.
   
   0.936
PHTF1
Putative homeodomain transcription factor 1.
 
    
 0.820
RBM27
Uncharacterized protein.
   
  
 0.769
THUMPD2
THUMP domain-containing protein.
      
 0.717
SCAF4
SR-related CTD associated factor 4.
   
  
 0.691
DDX51
DEAD-box helicase 51; Belongs to the DEAD box helicase family.
    
   0.683
STAM2
Signal transducing adaptor molecule 2.
      
 0.673
SECISBP2L
SECIS binding protein 2 like.
      
 0.652
PIFO
Primary cilia formation.
      
 0.645
RAD23A
RAD23 homolog A, nucleotide excision repair protein.
      
 0.628
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.