Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CNTN3Contactin 3. (1029 aa)    
Predicted Functional Partners:
MEGF11
Multiple EGF like domains 11.
   
  
 0.861
PTPRG
Protein tyrosine phosphatase receptor type G.
    
 0.734
DMRT3
Doublesex and mab-3 related transcription factor 3.
      
 0.719
NPY2R
Neuropeptide Y receptor Y2; Belongs to the G-protein coupled receptor 1 family.
   
 
 0.607
JAG1
Delta-like protein; Putative Notch ligand involved in the mediation of Notch signaling.
    
 0.585
SUSD1
Sushi domain containing 1.
    
 0.566
CHL1
Cell adhesion molecule L1 like.
   
 0.564
NRCAM
Neuronal cell adhesion molecule.
   
 0.564
L1CAM
L1 cell adhesion molecule.
   
 0.564
NFASC
Neurofascin.
   
 0.564
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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