STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LAMP5Lysosomal associated membrane protein family member 5. (280 aa)    
Predicted Functional Partners:
SNCG
Gamma-synuclein; Belongs to the synuclein family.
   
 
 0.675
OPALIN
Oligodendrocytic myelin paranodal and inner loop protein.
   
  
 0.563
SLC17A7
Solute carrier family 17 member 7.
   
  
 0.544
RORB
RAR related orphan receptor B.
   
  
 0.535
CPLX3
Complexin 3.
      
 0.472
LHX6
LIM homeobox 6.
      
 0.426
GAD1
Glutamate decarboxylase 1.
      
 0.413
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.