STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
HECTD4HECT domain E3 ubiquitin protein ligase 4. (4127 aa)    
Predicted Functional Partners:
EVC
EvC ciliary complex subunit 1.
   
 0.836
GGA3
Golgi associated, gamma adaptin ear containing, ARF binding protein 3.
   
 
 0.829
BRAP
BRCA1 associated protein.
      
 0.827
ACAD10
Acyl-CoA dehydrogenase family member 10.
    
 
 0.798
SLC17A3
Solute carrier family 17 member 3.
    
 
 0.795
CDSN
Corneodesmosin.
      
 0.673
G3U612_LOXAF
AlbA_2 domain-containing protein.
    
 
 0.614
RANBP2
RAN binding protein 2.
   
 0.587
GRASP
General receptor for phosphoinositides 1 associated scaffold protein.
    
 
 0.546
SLC4A4
Anion exchange protein.
      
 0.537
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.