Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
TTLL12Tubulin tyrosine ligase like 12. (638 aa)    
Predicted Functional Partners:
PBDC1
Polysaccharide biosynthesis domain containing 1.
    
   0.927
EEF1AKMT1
EEF1A lysine methyltransferase 1; Protein-lysine methyltransferase that selectively catalyzes the trimethylation of EEF1A at 'Lys-79'; Belongs to the class I-like SAM-binding methyltransferase superfamily. EFM5 family.
    
   0.810
DNAJB4
DnaJ heat shock protein family (Hsp40) member B4.
    
 
 0.793
TTLL1
Tubulin tyrosine ligase like 1.
      
 0.734
DNAJB1
DnaJ heat shock protein family (Hsp40) member B1.
    
 
 0.676
DNAJB13
DnaJ heat shock protein family (Hsp40) member B13.
    
 
 0.676
TTLL9
Tubulin tyrosine ligase like 9.
    
 
 0.654
TTLL5
Tubulin tyrosine ligase like 5.
      
 0.578
TRIP6
Thyroid hormone receptor interactor 6.
   
   0.569
MYEF2
Myelin expression factor 2.
      
 0.568
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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