STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
MEIOBMeiosis specific with OB-fold. (472 aa)    
Predicted Functional Partners:
WRN
WRN RecQ like helicase.
   
 0.925
FANCM
FA complementation group M.
    
 0.921
PCNA
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.
   
 0.866
MSH6
DNA mismatch repair protein; Component of the post-replicative DNA mismatch repair system (MMR).
   
 0.846
RAD52
RAD52 homolog, DNA repair protein.
    
 0.846
ATR
ATR serine/threonine kinase; Belongs to the PI3/PI4-kinase family.
    
 0.838
RFC5
AAA domain-containing protein.
   
 0.836
DNA2
DNA replication helicase/nuclease 2.
    
 0.827
POLD1
DNA polymerase.
   
 0.823
MCM8
MCM domain-containing protein; Belongs to the MCM family.
   
 0.822
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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