Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
SLC44A4Solute carrier family 44 member 4; Belongs to the CTL (choline transporter-like) family. (705 aa)    
Predicted Functional Partners:
SLC5A7
Solute carrier family 5 member 7; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.
     
 0.906
SLC22A3
Solute carrier family 22 member 3.
   
 
 0.894
SLC44A1
Solute carrier family 44 member 1; Belongs to the CTL (choline transporter-like) family.
   
 0.886
SLC44A3
Solute carrier family 44 member 3; Belongs to the CTL (choline transporter-like) family.
   
 0.885
SLC22A2
Solute carrier family 22 member 2.
   
 
 0.842
SLC22A1
Solute carrier family 22 member 1.
   
 
 0.842
SLC22A5
Solute carrier family 22 member 5.
   
 
 0.839
SLC22A4
Solute carrier family 22 member 4.
   
 
 0.839
SLC44A5
Solute carrier family 44 member 5; Belongs to the CTL (choline transporter-like) family.
     
  0.791
SLC44A2
Solute carrier family 44 member 2; Belongs to the CTL (choline transporter-like) family.
     
  0.791
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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