STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TMEM63CTransmembrane protein 63C. (743 aa)    
Predicted Functional Partners:
SNX15
Sorting nexin 15.
      
 0.572
OTULINL
OTU deubiquitinase with linear linkage specificity like.
      
 0.536
GOLGA3
Golgin A3.
   
 
 0.531
RNF150
Ring finger protein 150.
      
 0.524
VWA5A
Von Willebrand factor A domain containing 5A.
      
 0.523
SAMD4B
Sterile alpha motif domain containing 4B.
      
 0.519
RNPC3
RNA binding region (RNP1, RRM) containing 3.
      
 0.518
CCDC106
Coiled-coil domain containing 106.
      
 0.502
G3TZ65_LOXAF
INCENP_N domain-containing protein.
      
 0.444
G3U1J3_LOXAF
INCENP_ARK-bind domain-containing protein.
      
 0.444
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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