Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CEP350Centrosomal protein 350. (1947 aa)    
Predicted Functional Partners:
CEP19
Centrosomal protein 19.
    
 
 0.920
SMG1
SMG1 nonsense mediated mRNA decay associated PI3K related kinase; Belongs to the PI3/PI4-kinase family.
   
 0.800
G3UH79_LOXAF
Uncharacterized protein.
    
 
 0.798
ATAD2B
ATPase family AAA domain containing 2B.
   
 
 0.783
PPP2R3C
EF-hand_13 domain-containing protein.
    
   0.775
G3U287_LOXAF
Uncharacterized protein.
    
   0.775
CEP89
Centrosomal protein 89.
      
 0.766
FOPNL
FGFR1OP N-terminal like.
      
 0.737
TOR1AIP2
Torsin 1A interacting protein 2.
      
 0.729
DMXL1
Dmx like 1.
   
  
 0.724
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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