STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
G3T1E5_LOXAFUncharacterized protein. (225 aa)    
Predicted Functional Partners:
WHRN
Whirlin.
    
 0.633
USH1C
USH1 protein network component harmonin.
   
 0.603
GRIFIN
Galectin.
      
 0.564
FRMD7
FERM domain containing 7.
      
 0.555
ASB15
Ankyrin repeat and SOCS box containing 15.
   
 0.537
USH1G
USH1 protein network component sans.
   
 0.530
ANKS4B
Ankyrin repeat and sterile alpha motif domain containing 4B.
   
 0.530
NUAK2
NUAK family kinase 2.
   
  
 0.514
G3SWQ9_LOXAF
TPR_REGION domain-containing protein.
      
 0.462
G3TE99_LOXAF
Uncharacterized protein.
      
 0.462
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.