STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
TIPARPTCDD inducible poly(ADP-ribose) polymerase. (658 aa)    
Predicted Functional Partners:
RNF114
Ring finger protein 114.
    
  0.768
ZFAND5
Zinc finger AN1-type containing 5.
   
  
 0.647
PARP1
Poly [ADP-ribose] polymerase; Poly-ADP-ribosyltransferase that mediates poly-ADP- ribosylation of proteins and plays a key role in DNA repair.
    
 
 0.624
KDM2B
Lysine demethylase 2B.
    
 0.584
HABP4
Hyaluronan binding protein 4.
    
 
 0.552
MAGED1
MAGE family member D1.
    
 
 0.525
GPRC5B
G protein-coupled receptor class C group 5 member B.
      
 0.484
CIART
Circadian associated repressor of transcription.
      
 0.480
GPCPD1
Glycerophosphocholine phosphodiesterase 1.
  
  
 0.444
CYP1B1
Cytochrome P450 family 1 subfamily B member 1; Belongs to the cytochrome P450 family.
      
 0.443
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.