STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
G3T1F0_LOXAFCA domain-containing protein; Cadherins are calcium-dependent cell adhesion proteins. (286 aa)    
Predicted Functional Partners:
CDH19
Uncharacterized protein.
 
  
  0.959
CDH18
Uncharacterized protein.
 
   
  0.937
CTNNA2
Uncharacterized protein.
   
 0.714
CTNNA2-2
Uncharacterized protein.
   
 0.714
CTNNA1
Catenin alpha 1.
   
 0.714
CTNND1
Catenin delta 1.
    
  0.689
CDHR5
Cadherin related family member 5.
   
 
 0.636
CDH22
Cadherin 22; Cadherins are calcium-dependent cell adhesion proteins.
   
 
 
0.588
CDH15
Cadherin 15; Cadherins are calcium-dependent cell adhesion proteins.
   
 
0.582
CDH20
Cadherin 20; Cadherins are calcium-dependent cell adhesion proteins.
   
 
 
0.571
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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