STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SNX24Sorting nexin 24. (149 aa)    
Predicted Functional Partners:
GAPVD1
GTPase activating protein and VPS9 domains 1.
    
 
 0.813
SNX22
Sorting nexin 22.
    
   0.810
SPATA46
Spermatogenesis associated 46.
    
   0.798
CSNK1A1
Casein kinase 1 alpha 1; Belongs to the protein kinase superfamily.
    
   0.780
ZNF618
Zinc finger protein 618.
    
   0.682
SLC35E4
Solute carrier family 35 member E4.
      
 0.625
FAM136A
Family with sequence similarity 136 member A.
      
 0.622
GGCX
Gamma-glutamyl carboxylase.
      
 0.620
ZAP70
Tyrosine-protein kinase.
    
 0.612
SNX2
Sorting nexin 2.
 
    
 0.582
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.