STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
MYO6Myosin VI; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. (1285 aa)    
Predicted Functional Partners:
DAB2
DAB adaptor protein 2.
    
 0.962
TAX1BP1
Tax1 binding protein 1.
    
 
 0.932
CLTC
Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family.
    
 0.869
PAK3
Non-specific serine/threonine protein kinase.
    
  0.868
PAK1
Non-specific serine/threonine protein kinase.
    
  0.868
LRCH3
Leucine rich repeats and calponin homology domain containing 3.
    
 0.830
ARHGEF12
Rho guanine nucleotide exchange factor 12.
   
 
 0.827
TOM1
Target of myb1 membrane trafficking protein; Belongs to the TOM1 family.
    
 
 0.821
TOM1L2
Target of myb1 like 2 membrane trafficking protein; Belongs to the TOM1 family.
    
 
 0.821
CALCOCO2
Calcium binding and coiled-coil domain 2.
    
 
 0.819
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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