STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ETFRF1Electron transfer flavoprotein regulatory factor 1; Belongs to the complex I LYR family. (86 aa)    
Predicted Functional Partners:
NDUFAB1
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
    
 
 0.954
ETFA
Electron transfer flavoprotein subunit alpha.
   
 
 0.946
ETFB
Electron transfer flavoprotein subunit beta.
    
 
 0.833
MRPL46
Mitochondrial ribosomal protein L46.
    
   0.803
LYRM1
LYR motif containing 1; Belongs to the complex I LYR family.
      
 0.737
LYRM2
LYR motif containing 2; Belongs to the complex I LYR family.
   
  
 0.678
PALB2
Partner and localizer of BRCA2.
    
 
 0.645
LYRM4
Uncharacterized protein; Belongs to the complex I LYR family.
      
 0.599
SDHAF3
Uncharacterized protein.
      
 0.588
LYRM9
Uncharacterized protein; Belongs to the complex I LYR family.
      
 0.406
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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