STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CDH10Cadherin 10; Cadherins are calcium-dependent cell adhesion proteins. (787 aa)    
Predicted Functional Partners:
GAS8
Growth arrest specific 8.
      
 0.538
PRDM9
Uncharacterized protein.
    
 0.500
CTNNB1
Catenin beta 1.
    
 0.491
JUP
Junction plakoglobin.
    
 0.487
CTNND1
Catenin delta 1.
   
 0.445
ARVCF
ARVCF delta catenin family member.
   
 0.445
FSTL4
Follistatin like 4.
   
 
 0.415
CDH7
Cadherin 7; Cadherins are calcium-dependent cell adhesion proteins.
  
  
0.406
ANKZF1
Ankyrin repeat and zinc finger peptidyl tRNA hydrolase 1.
      
 0.403
WFIKKN1
WAP, follistatin/kazal, immunoglobulin, kunitz and netrin domain containing 1.
   
  
 0.402
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.