STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
POU6F2POU domain protein. (627 aa)    
Predicted Functional Partners:
COBL
Uncharacterized protein.
      
 0.484
G3UJI9_LOXAF
Uncharacterized protein.
   
  
 0.469
TSHZ3
Teashirt zinc finger homeobox 3.
   
  
 0.451
POLR2F
RNA polymerase II subunit F.
     
 0.439
IRX5
Iroquois homeobox 5.
    
 
 0.424
SLC6A2
Transporter; Belongs to the sodium:neurotransmitter symporter (SNF) (TC 2.A.22) family.
      
 0.419
FTO
FTO alpha-ketoglutarate dependent dioxygenase.
   
  
 0.414
IRX3
Iroquois homeobox 3.
    
 
 0.410
SRF
Serum response factor.
      
 0.404
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.