STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABCC6ATP binding cassette subfamily C member 6. (1502 aa)    
Predicted Functional Partners:
GGCX
Gamma-glutamyl carboxylase.
   
 
 0.790
ABCG5
ABC2_membrane domain-containing protein.
   
 0.660
ARID5B
AT-rich interaction domain 5B.
   
  
 0.576
ABCF3
ATP binding cassette subfamily F member 3.
  
 
 0.539
CUL7
Cullin 7; Belongs to the cullin family.
   
 
 0.539
MGP
Matrix Gla protein; Associates with the organic matrix of bone and cartilage.
   
  
 0.536
HNF4A
Hepatocyte nuclear factor 4 alpha.
   
  
 0.533
UBE2V1
UBIQUITIN_CONJUGAT_2 domain-containing protein.
     
 0.519
RPS23
Ribosomal protein S23; Belongs to the universal ribosomal protein uS12 family.
      
 0.511
NANS
N-acetylneuraminate synthase.
     
 0.503
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.