STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LRP12LDL receptor related protein 12. (847 aa)    
Predicted Functional Partners:
CSNK1A1
Casein kinase 1 alpha 1; Belongs to the protein kinase superfamily.
    
 0.648
APLP1
Amyloid beta precursor like protein 1.
    
 0.593
HYOU1
Hypoxia up-regulated 1.
    
 
 0.575
G3SS82_LOXAF
Uncharacterized protein.
      
 0.497
FKRP
Fukutin related protein.
     
 0.495
CCNE1
Cyclin E1; Belongs to the cyclin family.
      
 0.493
LRPAP1
LDL receptor related protein associated protein 1.
    
 0.490
LRCH1
Leucine rich repeats and calponin homology domain containing 1.
    
 0.483
ITSN2
Intersectin 2.
    
 0.475
RTN1
Reticulon.
   
  
 0.475
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
Server load: medium (52%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.