STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SEC11CSignal peptidase complex catalytic subunit SEC11. (192 aa)    
Predicted Functional Partners:
SPCS2
Signal peptidase complex subunit 2.
   
 0.984
SPCS3
Signal peptidase complex subunit 3.
   
 0.967
SPCS1
Signal peptidase complex subunit 1.
   
 0.964
SEC11A
Signal peptidase complex catalytic subunit SEC11.
  
  
 
0.886
GRPR
Gastrin releasing peptide receptor; Belongs to the G-protein coupled receptor 1 family.
   
 0.872
BRS3
Bombesin receptor subtype 3; Belongs to the G-protein coupled receptor 1 family.
   
 0.851
NMBR
Neuromedin B receptor; Belongs to the G-protein coupled receptor 1 family.
    
 0.777
NMB
Neuromedin B.
     
 0.744
POLR2G
RNA polymerase II subunit G.
 
 
    0.740
ALPL
Alkaline phosphatase.
    
 
 0.689
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.