STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
PCGF6Polycomb group ring finger 6. (326 aa)    
Predicted Functional Partners:
L3MBTL2
L3MBTL histone methyl-lysine binding protein 2.
    
 0.997
E2F6
E2F transcription factor 6.
    
 0.995
RING1
Ring finger protein 1.
   
 0.990
RYBP
RING1 and YY1 binding protein.
    
 0.962
PCGF5
Polycomb group ring finger 5.
    
0.961
RNF2
RING-type domain-containing protein.
   
 0.954
G3UB93_LOXAF
RAWUL domain-containing protein.
   
 0.954
YAF2
YY1 associated factor 2.
    
 0.944
G3THQ5_LOXAF
RING-type domain-containing protein.
    
0.934
CBX7
Chromobox 7.
    
 0.933
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.