STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
FAM210BFamily with sequence similarity 210 member B. (125 aa)    
Predicted Functional Partners:
ILVBL
IlvB acetolactate synthase like; Belongs to the TPP enzyme family.
      
 0.624
LMBR1
Limb development membrane protein 1; Belongs to the LIMR family.
      
 0.602
TERB1
Telomere repeat binding bouquet formation protein 1.
      
 0.591
PUM1
Pumilio RNA binding family member 1.
    
   0.578
PUM2
Pumilio RNA binding family member 2.
    
   0.578
CHST4
Sulfotransferase; Belongs to the sulfotransferase 1 family.
   
  
 0.568
FECH
Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX.
   
  
 0.560
MKLN1
Muskelin 1.
      
 0.554
ATP5IF1
ATP synthase inhibitory factor subunit 1.
   
  
 0.504
ANKLE1
Ankyrin repeat and LEM domain containing 1.
      
 0.500
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.