STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CSTF1Cleavage stimulation factor subunit 1. (431 aa)    
Predicted Functional Partners:
CSTF3
Cleavage stimulation factor subunit 3.
    
 0.999
CPSF2
Cleavage and polyadenylation specificity factor subunit 2.
   
 0.993
CSTF2
Cleavage stimulation factor subunit 2.
    
 0.971
CPSF3
Cleavage and polyadenylation specific factor 3.
   
 0.960
CSTF2T
Cleavage stimulation factor subunit 2 tau variant.
    
 0.957
CPSF1
Cleavage and polyadenylation specific factor 1.
   
 
 0.934
CPSF4
Cleavage and polyadenylation specific factor 4.
   
 0.919
FIP1L1
Factor interacting with PAPOLA and CPSF1.
    
 0.893
PCF11
PCF11 cleavage and polyadenylation factor subunit.
     
 0.888
SYMPK
Symplekin.
     
 0.888
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.