Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CASS4Cas scaffold protein family member 4. (810 aa)    
Predicted Functional Partners:
EPHA1
EPH receptor A1.
   
 0.798
PTK2B
Protein tyrosine kinase 2 beta; Belongs to the protein kinase superfamily. Tyr protein kinase family.
   
 0.761
NME8
NME/NM23 family member 8.
   
 0.716
CSTF1
Cleavage stimulation factor subunit 1.
 
   
 0.703
PTK2
Protein tyrosine kinase 2; Belongs to the protein kinase superfamily. Tyr protein kinase family.
   
 0.684
HIP1R
Huntingtin interacting protein 1 related.
    
 
 0.670
SORL1
Sortilin related receptor 1.
    
 
 0.668
CRKL
CRK like proto-oncogene, adaptor protein.
    
 0.663
CRK
CRK proto-oncogene, adaptor protein.
    
 0.663
TREML2
Ig-like domain-containing protein.
   
 
 0.652
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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