STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
PIWIL4Piwi like RNA-mediated gene silencing 4; Belongs to the argonaute family. (865 aa)    
Predicted Functional Partners:
TDRD9
Tudor domain containing 9.
   
 0.886
TDRKH
Tudor and KH domain containing.
   
 0.828
DICER1
Dicer 1, ribonuclease III; Belongs to the helicase family. Dicer subfamily.
    
 
 0.820
TDRD1
Tudor domain containing 1.
   
 0.767
MAEL
Maelstrom spermatogenic transposon silencer.
   
 0.731
SPACA1
Sperm acrosome associated 1.
   
  
 0.680
TDRD6
Tudor domain containing 6.
   
 0.668
TDRD15
Tudor domain containing 15.
   
 0.668
TNRC6A
Trinucleotide repeat containing adaptor 6A.
      
 0.653
MOV10L1
Mov10 like RISC complex RNA helicase 1.
   
 0.648
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.