STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
G3T1T4_LOXAFWD_REPEATS_REGION domain-containing protein. (497 aa)    
Predicted Functional Partners:
DDB1
Damage specific DNA binding protein 1.
    
 0.944
DCAF6
DDB1 and CUL4 associated factor 6.
     
 0.940
DCAF5
DDB1 and CUL4 associated factor 5.
     
 0.917
DCAF12
DDB1 and CUL4 associated factor 12.
     
 0.908
TRPC4AP
Transient receptor potential cation channel subfamily C member 4 associated protein.
   
 
 0.905
WDTC1
WD and tetratricopeptide repeats 1.
     
 0.865
DCAF11
DDB1- and CUL4-associated factor 11; May function as a substrate receptor for CUL4-DDB1 E3 ubiquitin-protein ligase complex; Belongs to the WD repeat LEC14B family.
     
 0.855
DCAF10
DDB1 and CUL4 associated factor 10.
     
 0.853
CUL4B
Cullin 4B; Belongs to the cullin family.
    
 0.841
CUL4A
Cullin 4A; Belongs to the cullin family.
    
 0.841
Your Current Organism:
Loxodonta africana
NCBI taxonomy Id: 9785
Other names: African bush elephant, African savanna elephant, African savannah elephant, L. africana, Loxodonta africana africana, elephant
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.